Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016615.1 Corchorus olitorius cultivar O-4 contig16648, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36624

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10485--10550
15
4.3
14
73
19
51
16
9
27
46
1.77
20518--20580
28
2.2
29
83
10
78
28
19
15
36
1.92
22905--22945
21
2.0
21
85
0
55
21
24
21
31
1.98
28769--28813
2
23.0
2
90
4
74
48
0
0
51
1.00
29885--29937
22
2.3
23
81
12
56
54
1
5
37
1.35
29901--29945
24
1.9
23
86
4
63
55
4
2
37
1.32
31862--31916
25
2.1
25
83
10
65
40
5
10
43
1.63
33041--33170
65
2.0
65
96
0
242
32
10
16
40
1.84
35118--35322
100
2.0
100
99
0
401
26
30
19
23
1.98

Tables:   1

The End!