Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016618.1 Corchorus olitorius cultivar O-4 contig16651, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4301

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
898--935
11
3.5
11
89
10
51
39
0
2
57
1.12
1096--1213
7
16.6
7
70
26
54
52
7
0
38
1.36
1382--1428
21
2.2
22
84
3
60
14
36
29
19
1.92
1394--1434
22
1.9
21
90
5
64
12
36
29
21
1.90
1403--1470
33
2.1
33
85
0
91
11
32
35
20
1.89
2488--2621
47
2.8
48
84
5
175
41
15
6
36
1.74
2488--2618
22
5.7
22
72
10
91
41
15
6
35
1.74

Tables:   1

The End!