Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016619.1 Corchorus olitorius cultivar O-4 contig16652, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12332

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--68
3
22.7
3
100
0
136
67
0
32
0
0.91
1296--1351
12
4.5
12
82
14
60
28
1
10
58
1.41
1296--1351
25
2.2
25
81
12
62
28
1
10
58
1.41
3378--3444
25
2.8
23
72
14
64
56
4
4
34
1.39
8356--8536
28
6.5
28
83
3
222
17
17
25
39
1.91
8356--8560
28
7.4
28
86
3
220
17
18
26
37
1.93

Tables:   1

The End!