Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016627.1 Corchorus olitorius cultivar O-4 contig16660, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10019

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
439--479
16
2.5
17
76
15
50
4
14
36
43
1.67
3266--3306
21
2.0
21
100
0
82
31
9
24
34
1.88
7944--8061
43
2.8
41
83
7
139
38
5
7
48
1.56
8948--8990
21
2.0
21
90
0
68
32
16
6
44
1.74
9715--9764
22
2.3
22
86
3
66
44
4
6
46
1.47
9958--10014
29
1.9
30
85
3
80
36
7
14
42
1.72

Tables:   1

The End!