Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016636.1 Corchorus olitorius cultivar O-4 contig16669, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31024

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
700--867
31
5.6
30
65
16
96
33
19
19
27
1.96
704--866
60
2.7
60
89
0
254
34
19
19
26
1.96
906--1044
31
4.6
29
75
13
129
26
20
18
34
1.96
12956--13528
66
8.7
66
84
6
671
22
31
19
27
1.98
13014--13528
132
3.9
132
89
1
748
21
31
19
27
1.97
12956--13528
198
2.9
197
85
5
764
22
31
19
27
1.98
18014--18119
54
2.0
53
92
1
176
28
30
9
32
1.88
25891--25915
13
1.9
13
100
0
50
48
0
4
48
1.20

Tables:   1

The End!