Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016637.1 Corchorus olitorius cultivar O-4 contig16670, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21701

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1477--1541
22
3.2
22
68
20
52
29
10
16
43
1.82
7860--7920
19
3.2
19
73
17
63
22
8
24
44
1.80
7865--7924
17
3.3
17
74
17
57
21
10
25
43
1.83
7850--7924
38
2.0
38
97
0
141
21
8
25
45
1.79
9439--9833
66
6.0
66
98
0
763
19
18
31
30
1.96
12229--12271
17
2.6
16
85
10
59
20
23
20
34
1.96
12222--12279
17
3.4
16
81
9
53
24
20
18
36
1.95
20119--20159
13
3.4
13
87
12
61
29
19
0
51
1.47
20717--20743
2
13.5
2
100
0
54
48
0
0
51
1.00
21642--21691
2
25.0
2
95
0
91
50
2
0
48
1.12

Tables:   1

The End!