Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016641.1 Corchorus olitorius cultivar O-4 contig16674, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20139

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6466--6498
16
2.1
16
94
0
57
33
18
27
21
1.96
8200--8255
16
3.6
16
95
2
96
64
10
8
16
1.49
12261--12295
14
2.5
14
90
9
54
74
0
25
0
0.82
16693--16771
30
2.6
30
87
0
95
26
16
20
36
1.93
16825--17141
79
4.0
79
96
0
555
28
24
16
29
1.97
18488--18571
30
2.8
29
83
7
89
27
20
17
34
1.95
19205--19528
43
7.7
42
85
9
414
42
25
10
21
1.84
19205--19528
84
3.9
84
93
2
537
42
25
10
21
1.84

Tables:   1

The End!