Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016646.1 Corchorus olitorius cultivar O-4 contig16679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31474

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10671--10705
14
2.5
14
100
0
70
31
20
34
14
1.92
11834--11878
17
2.7
17
86
3
56
48
6
0
44
1.29
13878--13907
2
15.0
2
92
0
51
46
0
0
53
1.00
14791--14878
42
2.2
40
89
4
131
35
4
20
39
1.73
18661--18818
22
7.2
21
73
13
97
37
13
8
39
1.77
22863--22939
30
2.5
31
76
14
79
28
19
14
37
1.91
23204--23308
31
3.5
30
79
10
106
36
13
22
27
1.92
23232--23308
29
2.6
29
83
6
91
33
11
23
31
1.91
23491--23586
46
2.1
47
98
2
185
39
17
4
38
1.69

Tables:   1

The End!