Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016653.1 Corchorus olitorius cultivar O-4 contig16686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9288

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
365--467
51
2.0
51
83
3
127
20
24
13
41
1.88
2001--2084
42
2.0
42
83
0
105
34
16
2
46
1.60
3687--3793
22
4.9
22
74
11
76
39
18
9
32
1.83
3862--4050
22
8.5
22
72
8
123
36
14
11
37
1.82
4316--4342
12
2.2
12
100
0
54
48
0
0
51
1.00
7229--7264
18
2.1
17
89
5
54
44
2
11
41
1.54
8640--8670
14
2.3
13
94
5
53
0
0
9
90
0.46
9247--9286
3
13.3
3
100
0
80
67
0
0
32
0.91

Tables:   1

The End!