Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016658.1 Corchorus olitorius cultivar O-4 contig16691, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23057

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--30
2
13.5
2
100
0
54
48
0
0
51
1.00
416--455
17
2.4
17
86
0
53
27
0
2
70
1.01
1751--1789
16
2.4
16
86
0
51
69
2
0
28
1.02
3788--3831
2
22.5
2
86
13
65
47
2
0
50
1.13
3788--3831
21
2.2
20
91
4
70
47
2
0
50
1.13
4275--4301
4
6.8
4
100
0
54
0
22
0
77
0.76
4981--5019
16
2.5
16
83
4
53
7
12
35
43
1.72
15242--15319
31
2.5
31
80
0
93
19
21
28
30
1.97
16447--16485
21
1.9
20
85
15
53
23
41
2
33
1.68
18599--19281
225
3.0
225
89
4
1029
41
15
10
32
1.82
22492--22562
31
2.3
31
90
0
106
32
12
19
35
1.90

Tables:   1

The End!