Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016684.1 Corchorus olitorius cultivar O-4 contig16717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6675

Tables:   1   

This is table  1  of  1  ( 3 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
385--415
16
1.9
16
93
0
53
54
3
12
29
1.53
1529--1583
20
2.8
20
74
0
56
36
12
1
49
1.52
1825--1866
16
2.4
18
76
19
52
33
9
16
40
1.81

Tables:   1

The End!