Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016691.1 Corchorus olitorius cultivar O-4 contig16724, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20686

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2701--2741
21
2.0
21
85
0
55
31
26
9
31
1.89
2834--2942
50
2.2
50
100
0
218
25
17
17
39
1.91
6279--6313
15
2.3
15
90
0
52
25
45
8
20
1.79
14061--14130
30
2.4
31
83
13
94
28
7
17
47
1.74
14053--14130
29
2.6
31
82
13
94
26
8
15
48
1.74
19146--19185
18
2.4
17
88
12
57
30
10
10
50
1.69

Tables:   1

The End!