Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016693.1 Corchorus olitorius cultivar O-4 contig16726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31630

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1741--1770
14
2.1
14
100
0
60
43
6
20
30
1.77
4021--4053
8
4.1
8
96
0
57
0
3
15
81
0.80
7642--7855
65
3.3
65
91
1
311
31
10
15
41
1.82
7574--7855
22
13.0
22
73
9
170
31
11
16
40
1.84
9263--9309
17
2.7
18
83
3
60
57
0
2
40
1.11
10901--10930
15
2.0
15
100
0
60
46
13
13
26
1.80
20453--20503
26
2.0
26
84
7
68
70
5
9
13
1.32
21484--21522
21
1.9
20
84
5
51
69
5
23
2
1.21

Tables:   1

The End!