Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016697.1 Corchorus olitorius cultivar O-4 contig16730, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28783

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8617--8652
19
1.9
18
88
5
54
30
25
8
36
1.85
14212--14269
29
2.0
29
93
0
98
18
8
15
56
1.64
16466--16528
29
2.2
29
83
8
76
44
3
3
49
1.34
16715--16759
15
2.9
16
86
6
65
42
40
15
2
1.59
17484--18247
274
2.8
273
91
3
1218
25
21
13
39
1.90
20628--20773
70
2.1
70
98
1
283
37
21
10
29
1.88
24772--24800
12
2.5
12
94
5
51
68
13
0
17
1.20

Tables:   1

The End!