Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016698.1 Corchorus olitorius cultivar O-4 contig16731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16587

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
244--273
16
1.9
16
93
6
53
46
13
3
36
1.60
11816--11841
12
2.2
12
100
0
52
42
26
7
23
1.81
12557--12581
13
1.9
13
100
0
50
16
40
16
28
1.89
12526--12704
44
4.0
44
79
9
175
24
37
13
24
1.92
12666--12738
28
2.6
28
97
0
137
24
38
15
21
1.92
12935--13058
18
7.3
18
79
17
133
4
28
21
45
1.72
12910--13058
65
2.3
65
88
7
232
5
27
20
46
1.72
13307--13332
12
2.2
12
100
0
52
42
26
7
23
1.81

Tables:   1

The End!