Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016700.1 Corchorus olitorius cultivar O-4 contig16733, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38502

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9464--9539
28
2.8
28
91
2
127
39
6
13
40
1.70
10251--10287
18
2.1
18
94
0
65
67
0
8
24
1.17
12062--12161
42
2.4
42
86
0
137
18
44
14
24
1.86
13572--13743
75
2.3
74
75
8
170
28
12
18
40
1.88
13684--13827
75
1.9
75
80
2
164
29
16
17
36
1.92
18191--18960
94
8.2
94
90
1
1107
29
17
5
47
1.69
18191--18960
189
4.1
188
90
1
1177
29
17
5
47
1.69
18191--18957
236
3.3
236
92
1
1240
29
17
5
47
1.69
22749--22817
26
2.6
26
86
2
93
33
28
24
13
1.93
32809--32883
28
2.7
28
78
10
91
37
12
22
28
1.90
35569--35699
33
3.8
33
84
6
145
38
16
14
30
1.89
36376--36438
23
2.7
23
77
2
63
49
20
9
20
1.77

Tables:   1

The End!