Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016701.1 Corchorus olitorius cultivar O-4 contig16734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4342

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
164--207
17
2.5
17
81
3
52
38
9
31
20
1.84
375--493
58
2.1
58
98
0
229
36
19
21
22
1.95
483--535
25
2.1
25
96
0
97
39
16
26
16
1.91
514--1464
32
29.6
32
82
9
1030
37
14
26
21
1.92
514--1469
97
9.9
99
84
7
1136
37
14
26
21
1.92
514--1464
66
14.8
65
82
8
1042
37
14
26
21
1.92

Tables:   1

The End!