Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016707.1 Corchorus olitorius cultivar O-4 contig16740, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19680

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3349--3391
19
2.4
19
84
7
54
46
11
27
13
1.78
10578--10649
29
2.4
30
83
2
92
26
26
8
38
1.84
13048--13103
28
2.0
28
86
6
78
35
7
0
57
1.26
14367--14394
14
2.0
14
100
0
56
28
0
21
50
1.49
14401--14464
31
2.1
31
91
5
103
18
6
14
60
1.54

Tables:   1

The End!