Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016712.1 Corchorus olitorius cultivar O-4 contig16745, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18601

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
725--775
26
2.0
26
96
0
93
52
9
21
15
1.71
1987--2072
12
7.2
12
87
0
127
17
37
1
44
1.57
1987--2092
36
2.9
36
85
0
149
17
33
3
44
1.67
1991--2092
12
8.5
12
86
0
123
18
33
3
44
1.68
2221--2309
24
3.9
23
76
8
101
26
24
0
48
1.52
2220--2309
45
2.0
45
86
0
126
26
25
0
47
1.52
3421--3457
16
2.3
16
95
0
65
10
8
0
81
0.89
3817--3849
17
2.1
16
88
11
50
30
0
0
69
0.88
9120--9173
27
2.0
27
100
0
108
33
11
11
44
1.75
9582--9637
29
2.0
28
92
3
94
28
10
21
39
1.87

Tables:   1

The End!