Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016715.1 Corchorus olitorius cultivar O-4 contig16748, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25185

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1804--1848
21
2.1
21
87
0
63
15
22
31
31
1.95
2953--3004
25
2.1
25
85
0
68
48
5
7
38
1.56
5607--5634
3
9.3
3
100
0
56
32
0
0
67
0.91
10779--10803
13
1.9
13
100
0
50
20
8
8
64
1.46
14621--14654
17
2.0
17
88
0
50
44
2
2
50
1.32
16634--16707
37
2.0
37
100
0
148
48
8
10
32
1.67
25147--25185
2
19.5
2
100
0
78
51
0
48
0
1.00

Tables:   1

The End!