Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016718.1 Corchorus olitorius cultivar O-4 contig16751, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7929

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--54
24
2.1
24
85
11
66
8
4
14
72
1.23
2841--2872
2
16.5
2
93
6
57
50
0
0
50
1.00
3315--3350
13
2.6
15
83
16
51
41
16
5
36
1.72
5395--5422
14
2.0
14
100
0
56
21
14
35
28
1.92
6858--6900
13
3.2
13
87
6
59
69
0
0
30
0.88
6848--6896
17
2.8
17
84
6
62
69
0
2
28
1.00

Tables:   1

The End!