Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016728.1 Corchorus olitorius cultivar O-4 contig16761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12909

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4430--4496
23
2.9
23
93
2
107
23
28
38
8
1.85
4481--4583
33
3.1
33
87
4
109
12
39
32
15
1.85
4619--4658
19
2.0
20
85
4
55
22
0
2
75
0.93
6991--7041
25
2.0
25
85
7
68
35
0
1
62
1.06
7559--7740
74
2.7
65
76
17
206
40
7
3
48
1.49
7598--7762
74
2.2
74
86
7
237
40
6
3
49
1.45
7924--7973
5
10.4
5
97
2
86
80
0
0
20
0.72

Tables:   1

The End!