Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016736.1 Corchorus olitorius cultivar O-4 contig16769, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6469

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
418--446
8
3.6
8
100
0
58
48
13
10
27
1.75
1853--1879
13
2.1
13
100
0
54
29
0
22
48
1.51
2086--2146
21
2.9
20
78
9
68
24
11
16
47
1.79
2082--2152
21
3.4
20
72
14
63
26
11
14
47
1.77
3062--3098
18
2.1
18
94
0
65
35
5
5
54
1.47
3573--4902
201
6.7
201
87
3
1813
33
18
13
34
1.90
5278--5306
7
4.3
7
95
4
51
41
0
0
58
0.98

Tables:   1

The End!