Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016737.1 Corchorus olitorius cultivar O-4 contig16770, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25451

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
187--597
206
2.0
206
97
0
779
36
10
11
41
1.76
588--623
7
5.4
7
96
3
58
47
0
8
44
1.33
1414--1455
16
2.7
16
92
3
68
50
16
9
23
1.75
5620--5682
30
2.1
30
87
0
90
34
17
12
34
1.88
6404--6509
31
3.5
30
74
10
90
32
23
18
25
1.97
17306--17356
26
2.0
26
100
0
102
39
27
7
25
1.83
17482--17587
53
2.1
51
86
12
146
38
13
8
39
1.75
18022--18205
68
2.6
69
91
6
291
48
3
12
35
1.57
19672--19743
36
2.0
36
100
0
144
25
36
13
25
1.93
23742--23789
16
3.1
16
82
5
55
54
2
39
4
1.32
24500--24564
27
2.4
27
92
0
103
56
16
1
24
1.49

Tables:   1

The End!