Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016738.1 Corchorus olitorius cultivar O-4 contig16771, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17326

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2876--2921
24
1.9
24
100
0
92
50
15
4
30
1.63
4031--4056
11
2.4
11
100
0
52
7
65
0
26
1.20
4101--4153
15
3.6
14
82
10
61
1
47
0
50
1.12
4101--4147
15
3.1
15
87
9
69
0
51
0
48
1.00
10153--10201
26
1.9
26
88
12
75
42
0
0
57
0.99
11517--11553
19
1.9
19
94
0
65
29
18
13
37
1.90
11939--11972
2
17.0
2
93
0
50
44
0
5
50
1.26
11935--11972
12
3.2
12
88
0
58
42
0
7
50
1.31
12223--12280
22
2.5
24
81
13
68
48
5
20
25
1.70
13406--13546
30
4.7
30
97
0
264
31
22
22
23
1.99
13527--13980
62
7.3
62
90
7
473
35
16
15
32
1.90
13527--13980
124
3.6
122
87
8
522
35
16
15
32
1.90

Tables:   1

The End!