Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016742.1 Corchorus olitorius cultivar O-4 contig16775, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14134

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2080--2137
19
2.9
19
87
5
80
36
12
22
29
1.90
2469--2575
53
2.0
53
98
0
205
42
5
40
12
1.66
9543--9576
12
2.8
12
95
4
59
26
26
32
14
1.95
10307--10431
22
5.7
22
77
11
123
40
13
8
37
1.76
10307--10431
65
1.9
65
82
9
157
40
13
8
37
1.76
10307--10474
44
3.9
43
78
9
164
36
13
8
40
1.76
12296--12409
56
2.0
56
96
0
210
34
23
1
40
1.65

Tables:   1

The End!