Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016746.1 Corchorus olitorius cultivar O-4 contig16779, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9232

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1181--1214
17
2.0
17
88
0
50
50
2
29
17
1.61
1273--1307
12
2.9
12
82
0
52
57
11
17
14
1.66
2059--2095
2
18.5
2
94
0
65
54
0
0
45
1.00
7762--7798
18
2.1
18
89
0
56
5
8
16
70
1.30
7857--7894
2
19.0
2
100
0
76
50
0
0
50
1.00
8391--8441
23
2.0
25
82
14
61
41
1
5
50
1.37

Tables:   1

The End!