Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016760.1 Corchorus olitorius cultivar O-4 contig16793, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14930

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
452--518
31
2.2
30
89
5
100
50
11
14
22
1.76
650--724
31
2.4
31
93
0
123
40
16
8
36
1.77
1766--1902
31
4.5
30
82
5
134
39
13
15
31
1.86
2031--2097
31
2.2
31
92
5
111
20
19
10
49
1.77
9708--9784
29
2.6
29
77
8
84
46
14
18
20
1.83
12815--12850
18
2.0
18
100
0
72
33
11
27
27
1.91
13050--13094
14
3.2
14
85
14
58
46
2
0
51
1.13
13208--13265
26
2.3
24
79
8
62
44
1
1
51
1.21
13550--13774
22
10.1
21
71
12
128
37
9
16
36
1.82
13539--13713
44
3.9
44
75
12
142
36
10
18
35
1.85
13924--13961
20
2.0
20
94
5
69
42
10
23
23
1.85
13779--14457
22
31.4
22
69
11
242
37
9
16
35
1.82
13994--14152
82
1.9
82
81
1
192
39
8
16
35
1.79
13779--14355
22
26.7
22
68
17
255
37
10
16
36
1.82
14815--14895
39
2.0
40
92
2
137
50
8
3
37
1.51

Tables:   1

The End!