Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016771.1 Corchorus olitorius cultivar O-4 contig16804, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46919

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30--68
20
2.0
20
90
10
62
33
12
10
43
1.77
9930--9971
15
2.7
15
96
3
75
66
14
7
11
1.43
13162--13221
30
2.0
31
83
9
79
30
16
31
21
1.96
14179--14289
43
2.6
43
82
10
140
39
29
9
20
1.85
19351--19386
6
5.8
6
93
3
54
61
0
0
38
0.96
20918--20990
29
2.4
31
80
11
80
45
2
1
50
1.24
25746--25806
16
4.0
16
74
20
58
1
26
0
72
0.94
25749--25808
11
5.4
11
75
11
59
1
23
0
75
0.90
28204--28250
22
2.1
22
96
0
85
14
23
23
38
1.92
32257--32294
18
2.1
18
95
0
67
13
21
13
52
1.73
40166--40206
17
2.4
17
91
4
64
9
12
7
70
1.33
42940--43000
30
2.0
30
84
9
79
18
9
11
60
1.57

Tables:   1

The End!