Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016775.1 Corchorus olitorius cultivar O-4 contig16808, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6393

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--118
4
27.8
4
69
14
62
26
5
0
66
1.20
1--104
25
4.3
25
76
16
92
26
6
0
65
1.24
36--74
19
2.1
19
85
0
51
28
10
0
61
1.28
1--107
27
4.1
25
81
4
90
27
6
0
65
1.23
68--110
19
2.3
19
83
0
59
27
2
2
67
1.15
3258--3304
15
3.1
15
85
8
60
0
25
0
74
0.82
3281--3337
13
4.4
13
84
6
71
3
19
0
77
0.92
3258--3338
13
6.2
13
71
14
60
2
22
0
75
0.92
3270--3350
25
3.2
25
72
18
69
2
23
0
74
0.94

Tables:   1

The End!