Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016776.1 Corchorus olitorius cultivar O-4 contig16809, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13662

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4335--4497
54
3.0
54
89
0
254
28
17
22
31
1.96
4462--4782
35
9.0
35
85
4
403
25
13
20
40
1.89
6392--6527
21
6.0
24
66
25
73
24
8
0
66
1.19
6420--6515
19
4.8
19
75
21
90
26
9
0
64
1.23
6397--6588
44
4.5
44
88
7
270
26
8
0
64
1.23
6422--6647
8
28.1
8
66
25
63
26
11
0
61
1.32
6603--6659
24
2.4
24
88
5
89
24
19
0
56
1.42
8594--8654
30
2.0
30
84
6
79
16
9
24
49
1.76

Tables:   1

The End!