Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016777.1 Corchorus olitorius cultivar O-4 contig16810, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29495

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3499--3582
21
3.9
21
74
10
62
32
16
10
40
1.83
3535--3597
21
3.0
21
79
9
74
25
17
12
44
1.84
3535--3616
42
1.9
43
82
2
103
25
18
9
46
1.79
7765--7798
14
2.3
15
90
10
52
14
5
11
67
1.39
11152--11222
33
2.2
33
97
0
133
18
40
29
11
1.85
12573--12608
19
1.9
18
88
5
54
27
22
8
41
1.82
18727--18768
20
2.1
20
86
0
57
66
7
19
7
1.39
19363--19398
19
1.9
18
88
5
54
27
22
8
41
1.82
27890--27924
15
2.2
16
90
5
54
14
5
11
68
1.37
28482--28513
2
16.0
2
93
0
55
50
3
0
46
1.17

Tables:   1

The End!