Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016790.1 Corchorus olitorius cultivar O-4 contig16823, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27264

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12259--12314
29
1.9
29
92
0
94
21
3
32
42
1.70
13082--13161
30
2.7
30
96
0
142
38
16
17
27
1.91
14980--15567
294
2.0
293
90
2
921
41
17
17
23
1.89
20944--21020
5
17.4
5
70
24
66
23
20
1
54
1.52
20953--21019
8
8.9
8
73
23
65
23
20
1
53
1.54
20948--21011
13
4.5
13
80
17
74
23
20
1
54
1.53
20944--21020
18
4.4
18
76
16
90
23
20
1
54
1.52
22810--22861
2
26.0
2
84
0
59
44
3
5
46
1.45

Tables:   1

The End!