Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016793.1 Corchorus olitorius cultivar O-4 contig16826, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11800

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2774--2807
15
2.2
16
94
5
61
70
0
11
17
1.16
3001--3109
22
4.9
22
94
2
182
22
20
14
42
1.88
3786--3816
12
2.6
12
100
0
62
0
16
32
51
1.44
4296--4378
42
2.0
43
85
7
116
36
22
18
22
1.95
5838--6052
22
9.7
22
73
10
127
38
8
15
36
1.79
6114--6187
37
2.0
37
100
0
148
37
10
18
32
1.86
9156--9301
55
2.7
55
91
1
231
30
19
29
20
1.97
10321--10346
2
13.0
2
100
0
52
50
0
0
50
1.00
10451--10480
15
2.0
15
100
0
60
33
6
6
53
1.53

Tables:   1

The End!