Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016796.1 Corchorus olitorius cultivar O-4 contig16829, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19631

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1029--1073
17
2.8
16
83
9
56
26
4
6
62
1.39
3528--3663
48
2.9
46
84
9
159
51
5
15
27
1.66
12547--12690
76
1.9
76
82
5
184
17
29
29
23
1.97
12887--12918
11
2.9
11
100
0
64
46
25
18
9
1.79
15303--15354
21
2.5
21
78
9
61
9
21
34
34
1.86

Tables:   1

The End!