Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016804.1 Corchorus olitorius cultivar O-4 contig16837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16977

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
779--820
15
2.7
15
92
3
66
11
9
14
64
1.50
4806--4861
29
1.9
29
85
7
78
46
8
19
25
1.79
9530--9577
25
1.9
25
91
0
78
37
8
16
37
1.79
12351--12389
18
2.2
18
90
0
60
15
28
15
41
1.87
12928--12965
14
2.5
16
91
8
62
76
0
15
7
1.01
14884--14925
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!