Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001681.1 Corchorus olitorius cultivar O-4 contig01681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5104

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--32
2
16.0
2
100
0
64
50
0
0
50
1.00
34--68
2
17.5
2
100
0
70
51
48
0
0
1.00
2439--2519
22
3.7
22
83
4
103
37
12
11
39
1.78
2439--2555
43
2.7
44
78
15
118
38
13
11
36
1.81
2547--2596
21
2.3
23
79
6
59
38
18
6
38
1.75
3230--3393
52
3.2
52
67
19
164
32
26
14
27
1.94
3191--3341
48
3.1
48
64
20
121
32
27
13
26
1.93
3191--3422
100
2.3
100
99
0
455
31
28
13
26
1.94

Tables:   1

The End!