Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016810.1 Corchorus olitorius cultivar O-4 contig16843, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9953

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
763--840
29
2.8
29
80
3
97
41
23
15
20
1.90
4061--4151
27
3.3
27
81
3
101
37
28
16
17
1.92
5937--5969
6
5.5
6
100
0
66
81
0
18
0
0.68
7432--7467
19
1.9
18
88
5
54
33
22
2
41
1.68
7432--7478
11
4.7
10
80
17
53
31
21
6
40
1.78
8938--9069
49
2.8
49
93
4
218
35
7
21
35
1.82
9281--9350
27
2.6
27
100
0
140
17
14
21
47
1.82

Tables:   1

The End!