Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016811.1 Corchorus olitorius cultivar O-4 contig16844, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4233

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
465--495
1
31.0
1
100
0
62
100
0
0
0
0.00
485--591
36
3.0
36
87
0
142
54
11
23
11
1.68
1407--1936
59
9.1
59
90
2
788
28
15
15
41
1.87
1402--1936
117
4.6
117
91
2
842
28
14
14
41
1.86
2212--2278
28
2.4
28
97
0
125
16
20
23
38
1.92
2264--2429
29
5.7
29
74
8
140
16
22
22
38
1.93
2264--2428
88
1.9
88
88
0
249
16
22
21
38
1.93
3397--3429
17
1.9
17
100
0
66
36
15
24
24
1.93

Tables:   1

The End!