Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016812.1 Corchorus olitorius cultivar O-4 contig16845, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8450

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1465--1491
9
3.0
9
100
0
54
0
0
22
77
0.76
4976--5006
15
2.1
15
93
0
53
83
0
16
0
0.64
5106--5150
17
2.6
18
96
3
83
44
6
8
40
1.62
5139--5176
14
2.6
16
80
20
55
39
7
10
42
1.69
5106--5165
18
3.5
17
86
13
56
43
6
10
40
1.64
5147--5176
13
2.2
14
94
5
53
43
6
13
36
1.70
6736--7387
35
18.3
35
80
4
572
20
21
18
40
1.92
6736--7395
142
4.6
143
79
5
656
20
21
18
40
1.92
6698--7371
355
1.9
353
84
4
892
20
21
18
40
1.92

Tables:   1

The End!