Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016836.1 Corchorus olitorius cultivar O-4 contig16869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8032

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
125--170
20
2.3
20
88
0
65
15
13
8
63
1.52
13--198
68
2.8
68
82
2
232
14
22
17
45
1.85
1236--1305
36
1.9
36
97
0
131
38
11
17
32
1.85
5916--5957
15
2.7
15
92
3
66
66
16
4
11
1.40

Tables:   1

The End!