Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016839.1 Corchorus olitorius cultivar O-4 contig16872, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19167

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9282--9323
21
2.0
21
90
0
66
28
23
16
30
1.96
9439--9530
21
4.4
21
93
2
134
27
26
18
28
1.98
10228--10297
21
3.4
21
92
7
117
25
24
21
28
1.99
11677--11723
26
1.9
24
87
12
69
40
4
27
27
1.75
11677--11733
28
2.1
26
81
12
62
43
3
26
26
1.70
12433--12474
21
2.0
21
90
0
66
28
23
16
30
1.96
12590--12681
21
4.4
21
88
2
116
27
23
18
30
1.98
14850--14935
43
2.0
43
100
0
172
37
18
13
30
1.90

Tables:   1

The End!