Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016844.1 Corchorus olitorius cultivar O-4 contig16877, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5397

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2428--2469
17
2.4
18
80
15
52
69
0
21
9
1.17
3367--3498
39
3.4
39
78
6
117
25
20
18
36
1.95
3406--3984
39
15.4
38
70
13
258
24
18
19
37
1.94
3486--3616
40
3.3
39
73
10
140
16
19
20
42
1.89
3450--3652
79
2.6
79
92
3
320
20
17
20
41
1.91
3510--3638
40
3.3
39
74
10
145
18
17
18
44
1.86
3884--3959
38
2.0
38
89
5
118
28
15
17
38
1.90
4735--4784
25
2.1
24
92
7
84
76
4
16
4
1.10

Tables:   1

The End!