Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016850.1 Corchorus olitorius cultivar O-4 contig16883, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18276

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
392--573
58
3.1
57
84
7
231
41
16
15
26
1.89
11584--11960
58
6.5
59
86
6
513
41
16
15
27
1.88
11584--11960
179
2.2
170
85
6
499
41
16
15
27
1.88
12790--12904
37
3.1
37
87
5
160
11
22
10
55
1.65
12848--12909
18
3.4
18
67
6
54
14
14
12
58
1.64
17563--17592
15
2.0
15
100
0
60
33
20
6
40
1.78
17641--17683
17
2.5
17
84
0
50
30
4
16
48
1.66

Tables:   1

The End!