Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016855.1 Corchorus olitorius cultivar O-4 contig16888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12545

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
450--584
73
1.9
72
89
4
209
39
17
14
28
1.89
450--581
36
3.7
35
79
8
133
39
18
13
28
1.89
5988--6031
14
3.0
15
83
6
63
38
6
18
36
1.77
6786--6863
31
2.5
32
83
6
97
35
3
21
38
1.72
6808--6868
31
2.0
31
93
0
104
32
3
26
37
1.73
7726--7752
13
2.1
13
100
0
54
22
22
22
33
1.97
10530--10642
58
1.9
58
87
7
167
31
13
21
33
1.92
11914--11983
36
1.9
36
88
5
106
20
10
10
60
1.57

Tables:   1

The End!