Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016861.1 Corchorus olitorius cultivar O-4 contig16894, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32152

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
365--410
13
3.8
13
83
8
53
36
6
8
47
1.60
3850--3901
22
2.4
21
78
9
59
75
1
15
5
1.07
5060--5104
3
15.0
3
95
0
72
62
0
37
0
0.96
6550--6601
12
4.2
12
80
11
61
38
3
7
50
1.50
10321--10364
21
2.0
23
86
8
65
61
4
27
6
1.41
17219--17260
10
4.1
10
84
3
57
16
47
30
4
1.67
17218--17255
20
1.9
20
94
0
67
15
44
36
2
1.61
18900--18937
19
2.1
19
90
5
60
44
15
13
26
1.83

Tables:   1

The End!