Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016862.1 Corchorus olitorius cultivar O-4 contig16895, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33251

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
821--867
3
15.7
3
100
0
94
68
0
0
31
0.90
6520--6550
6
5.0
6
96
4
53
83
0
16
0
0.64
6593--6649
20
2.8
20
76
7
62
75
1
19
3
1.04
14369--14423
2
27.5
2
81
0
65
49
0
7
43
1.30
26030--26067
19
2.1
18
85
14
51
15
34
10
39
1.82
26479--26567
27
3.3
27
93
6
155
17
13
23
44
1.84
32514--32586
26
2.7
27
80
4
85
19
12
26
42
1.86

Tables:   1

The End!