Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016871.1 Corchorus olitorius cultivar O-4 contig16904, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3734

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1487--1517
8
3.8
8
91
8
53
90
0
0
9
0.46
1487--1525
9
4.3
9
93
6
62
87
2
0
10
0.65
1656--1773
47
2.5
47
87
4
159
39
19
28
11
1.87
1741--1804
29
2.2
29
82
0
92
43
12
32
10
1.77
1770--1991
46
4.7
45
81
11
243
38
19
31
11
1.87
1964--2021
29
2.0
29
96
0
107
34
12
41
12
1.79
1838--2158
163
1.9
167
90
5
517
36
19
31
12
1.89
1993--2158
48
3.6
47
86
6
221
36
18
31
13
1.90
1993--2171
95
1.9
92
84
5
234
35
20
29
15
1.93
2169--2277
39
2.8
39
90
1
164
33
27
17
21
1.95
2325--2456
44
2.9
46
90
4
223
37
21
25
15
1.92

Tables:   1

The End!