Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016872.1 Corchorus olitorius cultivar O-4 contig16905, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30163

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6532--6571
15
2.6
16
88
4
55
62
12
10
15
1.54
12215--12275
32
1.9
32
96
0
113
36
21
24
18
1.95
15910--16039
65
2.0
65
87
0
188
23
26
26
23
2.00
19815--20102
89
3.2
89
91
0
479
34
15
23
26
1.95
19815--20137
89
3.6
88
84
6
420
33
16
24
25
1.96
28921--28969
21
2.3
21
82
6
55
40
16
28
14
1.87

Tables:   1

The End!