Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016876.1 Corchorus olitorius cultivar O-4 contig16909, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29347

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2783--2822
21
1.9
21
90
10
64
10
25
55
10
1.64
5566--5609
23
2.0
23
86
4
63
25
13
6
54
1.63
5602--5677
38
2.0
37
87
7
109
50
18
7
23
1.73
8792--8832
20
2.0
21
95
4
75
41
0
4
53
1.22
13929--13971
22
2.0
22
85
0
59
30
20
32
16
1.95
15134--15164
12
2.6
12
89
0
53
54
9
19
16
1.68
21968--22033
28
2.4
28
89
0
105
25
43
3
27
1.69
28004--28044
19
2.0
21
86
9
59
56
7
0
36
1.27

Tables:   1

The End!